nilmtools/nilmtools/filter.py

#!/usr/bin/python

import nilmdb.client
from nilmdb.client import Client
from nilmdb.client.numpyclient import NumpyClient
from nilmdb.utils.printf import *
from nilmdb.utils.time import (parse_time, timestamp_to_human,
                               timestamp_to_seconds)
from nilmdb.utils.interval import Interval

import nilmtools

import itertools
import time
import sys
import os
import re
import argparse
import numpy as np
import io
import functools

class ArgumentError(Exception):
    pass

class MissingDestination(Exception):
    def __init__(self, args, src, dest):
        self.parsed_args = args
        self.src = src
        self.dest = dest
        Exception.__init__(self, "destination path " + dest.path + " not found")

class StreamInfo(object):
    def __init__(self, url, info):
        self.url = url
        self.info = info
        try:
            self.path = info[0]
            self.layout = info[1]
            self.layout_type = self.layout.split('_')[0]
            self.layout_count = int(self.layout.split('_')[1])
            self.total_count = self.layout_count + 1
            self.timestamp_min = info[2]
            self.timestamp_max = info[3]
            self.rows = info[4]
            self.seconds = nilmdb.utils.time.timestamp_to_seconds(info[5])
        except IndexError as TypeError:
            pass

    def string(self, interhost):
        """Return stream info as a string.  If interhost is true,
        include the host URL."""
        if interhost:
            return sprintf("[%s] ", self.url) + str(self)
        return str(self)

    def __str__(self):
        """Return stream info as a string."""
        return sprintf("%s (%s), %.2fM rows, %.2f hours",
                       self.path, self.layout, self.rows / 1e6,
                       self.seconds / 3600.0)

def get_stream_info(client, path):
    """Return a StreamInfo object about the given path, or None if it
    doesn't exist"""
    streams = client.stream_list(path, extended = True)
    if len(streams) != 1:
        return None
    return StreamInfo(client.geturl(), streams[0])

# Filter processing for a single interval of data.
def process_numpy_interval(interval, extractor, inserter, warn_rows,
                           function, args = None):
    """For the given 'interval' of data, extract data, process it
    through 'function', and insert the result.

    'extractor' should be a function like NumpyClient.stream_extract_numpy
    but with the the interval 'start' and 'end' as the only parameters,
    e.g.:
       extractor = functools.partial(NumpyClient.stream_extract_numpy,
                                     src_path, layout = l, maxrows = m)

    'inserter' should be a function like NumpyClient.stream_insert_context
    but with the interval 'start' and 'end' as the only parameters, e.g.:
       inserter = functools.partial(NumpyClient.stream_insert_context,
                                    dest_path)

    If 'warn_rows' is not None, print a warning to stdout when the
    number of unprocessed rows exceeds this amount.

    See process_numpy for details on 'function' and 'args'.
    """
    if args is None:
        args = []

    with inserter(interval.start, interval.end) as insert_ctx:
        insert_func = insert_ctx.insert
        old_array = np.array([])
        for new_array in extractor(interval.start, interval.end):
            # If we still had old data left, combine it
            if old_array.shape[0] != 0:
                array = np.vstack((old_array, new_array))
            else:
                array = new_array

            # Pass the data to the user provided function
            processed = function(array, interval, args, insert_func, False)

            # Send any pending data that the user function inserted
            insert_ctx.send()

            # Save the unprocessed parts
            if processed >= 0:
                old_array = array[processed:]
            else:
                raise Exception(
                    sprintf("%s return value %s must be >= 0",
                            str(function), str(processed)))

            # Warn if there's too much data remaining
            if warn_rows is not None and old_array.shape[0] > warn_rows:
                printf("warning: %d unprocessed rows in buffer\n",
                       old_array.shape[0])

        # Last call for this contiguous interval
        if old_array.shape[0] != 0:
            processed = function(old_array, interval, args,
                                 insert_func, True)
            if processed != old_array.shape[0]:
                # Truncate the interval we're inserting at the first
                # unprocessed data point.  This ensures that
                # we'll not miss any data when we run again later.
                insert_ctx.update_end(old_array[processed][0])

def example_callback_function(data, interval, args, insert_func, final):
    """Example of the signature for the function that gets passed
    to process_numpy_interval.

    'data': array of data to process -- may be empty

    'interval': overall interval we're processing (but not necessarily
    the interval of this particular chunk of data)

    'args': opaque arguments passed to process_numpy

    'insert_func': function to call in order to insert array of data.
    Should be passed a 2-dimensional array of data to insert.
    Data timestamps must be within the provided interval.

    'final': True if this is the last bit of data for this
    contiguous interval, False otherwise.

    Return value of 'function' is the number of data rows processed.
    Unprocessed data will be provided again in a subsequent call
    (unless 'final' is True).

    If unprocessed data remains after 'final' is True, the interval
    being inserted will be ended at the timestamp of the first
    unprocessed data point.
    """
    raise NotImplementedError("example_callback_function does nothing")

class Filter(object):

    def __init__(self, parser_description = None):
        self._parser = None
        self._client_src = None
        self._client_dest = None
        self._using_client = False
        self.src = None
        self.dest = None
        self.start = None
        self.end = None
        self._interhost = False
        self._force_metadata = False
        if parser_description is not None:
            self.setup_parser(parser_description)
            self.parse_args()
        self.def_url = os.environ.get("NILMDB_URL", "http://localhost/nilmdb/")

    @property
    def client_src(self):
        if self._using_client:
            raise Exception("Filter client is in use; make another")
        return self._client_src

    @property
    def client_dest(self):
        if self._using_client:
            raise Exception("Filter client is in use; make another")
        return self._client_dest

    def setup_parser(self, description = "Filter data", skip_paths = False):
        parser = argparse.ArgumentParser(
            formatter_class = argparse.RawDescriptionHelpFormatter,
            description = description)
        group = parser.add_argument_group("General filter arguments")
        group.add_argument("-u", "--url", action="store",
                           default=self.def_url,
                           help="Server URL (default: %(default)s)")
        group.add_argument("-U", "--dest-url", action="store",
                           help="Destination server URL "
                           "(default: same as source)")
        group.add_argument("-D", "--dry-run", action="store_true",
                           default = False,
                           help="Just print intervals that would be "
                           "processed")
        group.add_argument("-F", "--force-metadata", action="store_true",
                           default = False,
                           help="Force metadata changes if the dest "
                           "doesn't match")
        group.add_argument("-s", "--start",
                           metavar="TIME", type=self.arg_time,
                           help="Starting timestamp for intervals "
                           "(free-form, inclusive)")
        group.add_argument("-e", "--end",
                           metavar="TIME", type=self.arg_time,
                           help="Ending timestamp for intervals "
                           "(free-form, noninclusive)")
        group.add_argument("-v", "--version", action="version",
                           version = nilmtools.__version__)

        if not skip_paths:
            # Individual filter scripts might want to add these arguments
            # themselves, to include multiple sources in a different order
            # (for example).  "srcpath" and "destpath" arguments must exist,
            # though.
            group.add_argument("srcpath", action="store",
                               help="Path of source stream, e.g. /foo/bar")
            group.add_argument("destpath", action="store",
                               help="Path of destination stream, e.g. /foo/bar")
        self._parser = parser
        return parser

    def set_args(self, url, dest_url, srcpath, destpath, start, end,
                 parsed_args = None, quiet = True):
        """Set arguments directly from parameters"""
        if dest_url is None:
            dest_url = url
        if url != dest_url:
            self._interhost = True

        self._client_src = Client(url)
        self._client_dest = Client(dest_url)

        if (not self._interhost) and (srcpath == destpath):
            raise ArgumentError("source and destination path must be different")

        # Open the streams
        self.src = get_stream_info(self._client_src, srcpath)
        if not self.src:
            raise ArgumentError("source path " + srcpath + " not found")

        self.dest = get_stream_info(self._client_dest, destpath)
        if not self.dest:
            raise MissingDestination(parsed_args, self.src,
                                     StreamInfo(dest_url, [destpath]))

        self.start = start
        self.end = end

        # Print info
        if not quiet:
            print("Source:", self.src.string(self._interhost))
            print("  Dest:", self.dest.string(self._interhost))

    def parse_args(self, argv = None):
        """Parse arguments from a command line"""
        args = self._parser.parse_args(argv)

        self.set_args(args.url, args.dest_url, args.srcpath, args.destpath,
                      args.start, args.end, quiet = False, parsed_args = args)

        self._force_metadata = args.force_metadata
        if args.dry_run:
            for interval in self.intervals():
                print(interval.human_string())
            raise SystemExit(0)
        return args

    def intervals(self):
        """Generate all the intervals that this filter should process"""
        self._using_client = True

        if self._interhost:
            # Do the difference ourselves
            s_intervals = ( Interval(start, end)
                            for (start, end) in
                            self._client_src.stream_intervals(
                                self.src.path,
                                start = self.start, end = self.end) )
            d_intervals = ( Interval(start, end)
                            for (start, end) in
                            self._client_dest.stream_intervals(
                                self.dest.path,
                                start = self.start, end = self.end) )
            intervals = nilmdb.utils.interval.set_difference(s_intervals,
                                                             d_intervals)
        else:
            # Let the server do the difference for us
            intervals = ( Interval(start, end)
                          for (start, end) in
                          self._client_src.stream_intervals(
                              self.src.path, diffpath = self.dest.path,
                              start = self.start, end = self.end) )
        # Optimize intervals: join intervals that are adjacent
        for interval in nilmdb.utils.interval.optimize(intervals):
            yield interval
        self._using_client = False

    # Misc helpers
    @staticmethod
    def arg_time(toparse):
        """Parse a time string argument"""
        try:
            return nilmdb.utils.time.parse_time(toparse)
        except ValueError as e:
            raise argparse.ArgumentTypeError(sprintf("%s \"%s\"",
                                                     str(e), toparse))

    def check_dest_metadata(self, data):
        """See if the metadata jives, and complain if it doesn't.  For
        each key in data, if the stream contains the key, it must match
        values.  If the stream does not contain the key, it is created."""
        metadata = self._client_dest.stream_get_metadata(self.dest.path)
        if not self._force_metadata:
            for key in data:
                wanted = data[key]
                if not isinstance(wanted, str):
                    wanted = str(wanted)
                val = metadata.get(key, wanted)
                # Force UTF-8 encoding for comparison and display
                wanted = wanted.encode('utf-8')
                val = val.encode('utf-8')
                key = key.encode('utf-8')
                if val != wanted and self.dest.rows > 0:
                    m =  "Metadata in destination stream:\n"
                    m += "  %s = %s\n" % (key, val)
                    m += "doesn't match desired data:\n"
                    m += "  %s = %s\n" % (key, wanted)
                    m += "Refusing to change it.  To prevent this error, "
                    m += "change or delete the metadata with nilmtool,\n"
                    m += "remove existing data from the stream, or "
                    m += "retry with --force-metadata."
                    raise Exception(m)
        # All good -- write the metadata in case it's not already there
        self._client_dest.stream_update_metadata(self.dest.path, data)

    # The main filter processing method.
    def process_numpy(self, function, args = None, rows = 100000,
                      intervals = None):
        """Calls process_numpy_interval for each interval that currently
        exists in self.src, but doesn't exist in self.dest.  It will
        process the data in chunks as follows:

        For each chunk of data, call 'function' with a Numpy array
        corresponding to the data.  The data is converted to a Numpy
        array in chunks of 'rows' rows at a time.

        If 'intervals' is not None, process those intervals instead of
        the default list.

        'function' should be defined with the same interface as
        nilmtools.filter.example_callback_function.  See the
        documentation of that for details.  'args' are passed to
        'function'.
        """
        extractor = NumpyClient(self.src.url).stream_extract_numpy
        inserter = NumpyClient(self.dest.url).stream_insert_numpy_context

        extractor_func = functools.partial(extractor, self.src.path,
                                           layout = self.src.layout,
                                           maxrows = rows)
        inserter_func = functools.partial(inserter, self.dest.path)

        for interval in (intervals or self.intervals()):
            print("Processing", interval.human_string())
            process_numpy_interval(interval, extractor_func, inserter_func,
                                   rows * 3, function, args)

def main(argv = None):
    # This is just a dummy function; actual filters can use the other
    # functions to prepare stuff, and then do something with the data.
    f = Filter()
    parser = f.setup_parser()
    args = f.parse_args(argv)
    for i in f.intervals():
        print("Generic filter: need to handle", i.human_string())

if __name__ == "__main__":
    main()