2012-04-11 18:05:27 -04:00
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# -*- coding: utf-8 -*-
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2012-03-27 19:19:08 -04:00
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import nilmdb
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2012-12-31 15:52:28 -05:00
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from nilmdb.utils.printf import *
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2013-01-30 19:03:42 -05:00
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from nilmdb.utils import datetime_tz
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2012-03-27 19:19:08 -04:00
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from nose.tools import *
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from nose.tools import assert_raises
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import itertools
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2013-03-15 21:11:26 -04:00
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from nilmdb.utils.interval import IntervalError
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from nilmdb.server.interval import Interval, DBInterval, IntervalSet
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2012-03-28 15:25:02 -04:00
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2013-03-15 21:35:35 -04:00
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# so we can test them separately
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from nilmdb.utils.interval import Interval as UtilsInterval
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2013-01-05 15:00:34 -05:00
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from testutil.helpers import *
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import unittest
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2012-03-29 17:43:05 -04:00
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2012-11-29 00:42:50 -05:00
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# set to False to skip live renders
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do_live_renders = False
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def render(iset, description = "", live = True):
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import testutil.renderdot as renderdot
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r = renderdot.RBTreeRenderer(iset.tree)
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return r.render(description, live and do_live_renders)
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2012-03-29 17:43:05 -04:00
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def makeset(string):
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"""Build an IntervalSet from a string, for testing purposes
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2012-03-28 15:25:02 -04:00
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Each character is 1 second
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[ = interval start
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| = interval end + next start
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] = interval end
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. = zero-width interval (identical start and end)
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anything else is ignored
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"""
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iset = IntervalSet()
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for i, c in enumerate(string):
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day = i + 10000
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if (c == "["):
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start = day
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elif (c == "|"):
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iset += Interval(start, day)
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start = day
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elif (c == ")"):
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iset += Interval(start, day)
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del start
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elif (c == "."):
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iset += Interval(day, day)
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return iset
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class TestInterval:
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def test_client_interval(self):
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# Run interval tests against the Python version of Interval.
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global Interval
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NilmdbInterval = Interval
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Interval = UtilsInterval
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self.test_interval()
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self.test_interval_intersect()
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Interval = NilmdbInterval
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def test_interval(self):
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# Test Interval class
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os.environ['TZ'] = "America/New_York"
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datetime_tz._localtz = None
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(d1, d2, d3) = [ nilmdb.utils.time.parse_time(x)
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for x in [ "03/24/2012", "03/25/2012", "03/26/2012" ] ]
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# basic construction
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i = Interval(d1, d2)
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i = Interval(d1, d3)
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eq_(i.start, d1)
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eq_(i.end, d3)
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# assignment is allowed, but not verified
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i.start = d2
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#with assert_raises(IntervalError):
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# i.end = d1
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i.start = d1
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i.end = d2
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# end before start
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with assert_raises(IntervalError):
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i = Interval(d3, d1)
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# compare
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assert(Interval(d1, d2) == Interval(d1, d2))
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assert(Interval(d1, d2) < Interval(d1, d3))
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assert(Interval(d1, d3) > Interval(d1, d2))
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assert(Interval(d1, d2) < Interval(d2, d3))
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assert(Interval(d1, d3) < Interval(d2, d3))
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assert(Interval(d2, d2+1) > Interval(d1, d3))
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assert(Interval(d3, d3+1) == Interval(d3, d3+1))
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#with assert_raises(TypeError): # was AttributeError, that's wrong
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# x = (i == 123)
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# subset
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eq_(Interval(d1, d3).subset(d1, d2), Interval(d1, d2))
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with assert_raises(IntervalError):
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x = Interval(d2, d3).subset(d1, d2)
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# big integers, negative integers
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x = Interval(5000111222000000, 6000111222000000)
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eq_(str(x), "[5000111222000000 -> 6000111222000000)")
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x = Interval(-5000111222000000, -4000111222000000)
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eq_(str(x), "[-5000111222000000 -> -4000111222000000)")
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# misc
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i = Interval(d1, d2)
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eq_(repr(i), repr(eval(repr(i))))
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eq_(str(i), "[1332561600000000 -> 1332648000000000)")
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def test_interval_intersect(self):
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# Test Interval intersections
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dates = [ 100, 200, 300, 400 ]
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perm = list(itertools.permutations(dates, 2))
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prod = list(itertools.product(perm, perm))
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should_intersect = {
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False: [4, 5, 8, 20, 48, 56, 60, 96, 97, 100],
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True: [0, 1, 2, 12, 13, 14, 16, 17, 24, 25, 26, 28, 29,
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32, 49, 50, 52, 53, 61, 62, 64, 65, 68, 98, 101, 104]
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}
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for i,((a,b),(c,d)) in enumerate(prod):
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try:
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i1 = Interval(a, b)
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i2 = Interval(c, d)
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eq_(i1.intersects(i2), i2.intersects(i1))
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in_(i, should_intersect[i1.intersects(i2)])
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except IntervalError:
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assert(i not in should_intersect[True] and
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i not in should_intersect[False])
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with assert_raises(TypeError):
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x = i1.intersects(1234)
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def test_intervalset_construct(self):
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# Test IntervalSet construction
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dates = [ 100, 200, 300, 400 ]
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a = Interval(dates[0], dates[1])
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b = Interval(dates[1], dates[2])
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c = Interval(dates[0], dates[2])
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d = Interval(dates[2], dates[3])
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iseta = IntervalSet(a)
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isetb = IntervalSet([a, b])
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isetc = IntervalSet([a])
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ne_(iseta, isetb)
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eq_(iseta, isetc)
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with assert_raises(TypeError):
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x = iseta != 3
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ne_(IntervalSet(a), IntervalSet(b))
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2012-12-11 23:31:55 -05:00
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# Note that assignment makes a new reference (not a copy)
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isetd = IntervalSet(isetb)
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isete = isetd
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eq_(isetd, isetb)
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eq_(isetd, isete)
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isetd -= a
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ne_(isetd, isetb)
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eq_(isetd, isete)
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2012-04-12 18:39:16 -04:00
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# test iterator
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for interval in iseta:
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pass
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# overlap
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with assert_raises(IntervalError):
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x = IntervalSet([a, b, c])
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# bad types
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with assert_raises(Exception):
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x = IntervalSet([1, 2])
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iset = IntervalSet(isetb) # test iterator
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eq_(iset, isetb)
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eq_(len(iset), 2)
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eq_(len(IntervalSet()), 0)
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# Test adding
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iset = IntervalSet(a)
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iset += IntervalSet(b)
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eq_(iset, IntervalSet([a, b]))
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iset = IntervalSet(a)
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iset += b
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eq_(iset, IntervalSet([a, b]))
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iset = IntervalSet(a)
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iset.iadd_nocheck(b)
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eq_(iset, IntervalSet([a, b]))
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iset = IntervalSet(a) + IntervalSet(b)
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eq_(iset, IntervalSet([a, b]))
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iset = IntervalSet(b) + a
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eq_(iset, IntervalSet([a, b]))
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# A set consisting of [0-1],[1-2] should match a set consisting of [0-2]
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eq_(IntervalSet([a,b]), IntervalSet([c]))
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# Etc
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ne_(IntervalSet([a,d]), IntervalSet([c]))
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ne_(IntervalSet([c]), IntervalSet([a,d]))
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ne_(IntervalSet([c,d]), IntervalSet([b,d]))
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# misc
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eq_(repr(iset), repr(eval(repr(iset))))
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eq_(str(iset),
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"[[100 -> 200), [200 -> 300)]")
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def test_intervalset_geniset(self):
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# Test basic iset construction
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eq_(makeset(" [----) "),
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makeset(" [-|--) "))
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eq_(makeset("[) [--) ") +
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makeset(" [) [--)"),
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makeset("[|) [-----)"))
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eq_(makeset(" [-------)"),
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makeset(" [-|-----|"))
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def test_intervalset_intersect_difference(self):
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# Test intersection (&)
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with assert_raises(TypeError): # was AttributeError
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x = makeset("[--)") & 1234
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def do_test(a, b, c, d):
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# a & b == c
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ab = IntervalSet()
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for x in b:
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for i in (a & x):
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ab += i
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eq_(ab,c)
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# a \ b == d
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eq_(IntervalSet(nilmdb.utils.interval.set_difference(a,b)), d)
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# Intersection with intervals
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do_test(makeset("[---|---)[)"),
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makeset(" [------) "),
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makeset(" [-----) "), # intersection
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makeset("[-) [)")) # difference
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do_test(makeset("[---------)"),
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makeset(" [---) "),
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makeset(" [---) "), # intersection
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makeset("[) [----)")) # difference
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do_test(makeset(" [---) "),
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makeset("[---------)"),
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makeset(" [---) "), # intersection
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makeset(" ")) # difference
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do_test(makeset(" [-----)"),
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makeset(" [-----) "),
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makeset(" [--) "), # intersection
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makeset(" [--)")) # difference
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do_test(makeset(" [--) [--)"),
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makeset(" [------) "),
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makeset(" [-) [-) "), # intersection
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makeset(" [) [)")) # difference
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do_test(makeset(" [---)"),
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makeset(" [--) "),
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makeset(" "), # intersection
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makeset(" [---)")) # difference
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do_test(makeset(" [-|---)"),
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makeset(" [-----|-) "),
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makeset(" [----) "), # intersection
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makeset(" [)")) # difference
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do_test(makeset(" [-|-) "),
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makeset(" [-|--|--) "),
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makeset(" [---) "), # intersection
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makeset(" ")) # difference
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do_test(makeset("[-)[-)[-)[)"),
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makeset(" [) [|)[) "),
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makeset(" [) [) "), # intersection
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makeset("[) [-) [)[)")) # difference
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# Border cases -- will give different results if intervals are
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# half open or fully closed. In nilmdb, they are half open.
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do_test(makeset(" [---)"),
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makeset(" [----) "),
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makeset(" "), # intersection
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makeset(" [---)")) # difference
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do_test(makeset(" [----)[--)"),
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makeset("[-) [--) [)"),
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makeset(" [) [-) [)"), # intersection
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makeset(" [-) [-) ")) # difference
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# Set difference with bounds
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a = makeset(" [----)[--)")
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b = makeset("[-) [--) [)")
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c = makeset("[----) ")
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d = makeset(" [-) ")
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2013-03-15 21:11:26 -04:00
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eq_(nilmdb.utils.interval.set_difference(
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a.intersection(list(c)[0]), b.intersection(list(c)[0])), d)
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2013-03-11 15:16:06 -04:00
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# Empty second set
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2013-03-15 21:11:26 -04:00
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eq_(nilmdb.utils.interval.set_difference(a, IntervalSet()), a)
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2012-04-11 18:05:27 -04:00
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2012-11-08 17:56:05 -05:00
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class TestIntervalDB:
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2012-05-25 17:45:05 -04:00
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def test_dbinterval(self):
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# Test DBInterval class
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i = DBInterval(100, 200, 100, 200, 10000, 20000)
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eq_(i.start, 100)
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eq_(i.end, 200)
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eq_(i.db_start, 100)
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eq_(i.db_end, 200)
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eq_(i.db_startpos, 10000)
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eq_(i.db_endpos, 20000)
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eq_(repr(i), repr(eval(repr(i))))
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# end before start
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with assert_raises(IntervalError):
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i = DBInterval(200, 100, 100, 200, 10000, 20000)
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# db_start too late
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|
with assert_raises(IntervalError):
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i = DBInterval(100, 200, 150, 200, 10000, 20000)
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|
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# db_end too soon
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|
|
with assert_raises(IntervalError):
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i = DBInterval(100, 200, 100, 150, 10000, 20000)
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|
|
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|
# actual start, end can be a subset
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|
|
|
a = DBInterval(150, 200, 100, 200, 10000, 20000)
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|
b = DBInterval(100, 150, 100, 200, 10000, 20000)
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2013-02-21 14:06:40 -05:00
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c = DBInterval(150, 160, 100, 200, 10000, 20000)
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2012-05-25 17:45:05 -04:00
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|
|
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|
# Make a set of DBIntervals
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|
|
iseta = IntervalSet([a, b])
|
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|
|
isetc = IntervalSet(c)
|
|
|
|
assert(iseta.intersects(a))
|
|
|
|
assert(iseta.intersects(b))
|
|
|
|
|
|
|
|
# Test subset
|
|
|
|
with assert_raises(IntervalError):
|
|
|
|
x = a.subset(150, 250)
|
|
|
|
|
|
|
|
# Subset of those IntervalSets should still contain DBIntervals
|
|
|
|
for i in IntervalSet(iseta.intersection(Interval(125,250))):
|
|
|
|
assert(isinstance(i, DBInterval))
|
|
|
|
|
2012-11-13 22:55:37 -05:00
|
|
|
class TestIntervalTree:
|
|
|
|
|
|
|
|
def test_interval_tree(self):
|
|
|
|
import random
|
2012-11-15 13:55:56 -05:00
|
|
|
random.seed(1234)
|
|
|
|
|
2012-11-29 00:42:50 -05:00
|
|
|
# make a set of 100 intervals
|
2012-11-13 22:55:37 -05:00
|
|
|
iset = IntervalSet()
|
2012-11-29 00:42:50 -05:00
|
|
|
j = 100
|
2012-11-13 22:55:37 -05:00
|
|
|
for i in random.sample(xrange(j),j):
|
|
|
|
interval = Interval(i, i+1)
|
|
|
|
iset += interval
|
2012-11-29 00:42:50 -05:00
|
|
|
render(iset, "Random Insertion")
|
2012-11-28 18:34:51 -05:00
|
|
|
|
2012-11-13 22:55:37 -05:00
|
|
|
# remove about half of them
|
|
|
|
for i in random.sample(xrange(j),j):
|
|
|
|
if random.randint(0,1):
|
|
|
|
iset -= Interval(i, i+1)
|
|
|
|
|
2012-11-15 13:55:56 -05:00
|
|
|
# try removing an interval that doesn't exist
|
|
|
|
with assert_raises(IntervalError):
|
|
|
|
iset -= Interval(1234,5678)
|
2012-11-29 00:42:50 -05:00
|
|
|
render(iset, "Random Insertion, deletion")
|
2012-11-15 13:55:56 -05:00
|
|
|
|
2012-11-29 00:42:50 -05:00
|
|
|
# make a set of 100 intervals, inserted in order
|
2012-11-28 18:34:51 -05:00
|
|
|
iset = IntervalSet()
|
2012-11-29 00:42:50 -05:00
|
|
|
j = 100
|
2012-11-28 18:34:51 -05:00
|
|
|
for i in xrange(j):
|
|
|
|
interval = Interval(i, i+1)
|
|
|
|
iset += interval
|
2012-11-29 00:42:50 -05:00
|
|
|
render(iset, "In-order insertion")
|
2012-11-13 22:55:37 -05:00
|
|
|
|
2012-04-11 18:05:27 -04:00
|
|
|
class TestIntervalSpeed:
|
2013-01-05 15:05:42 -05:00
|
|
|
@unittest.skip("this is slow")
|
2012-04-11 18:05:27 -04:00
|
|
|
def test_interval_speed(self):
|
|
|
|
import yappi
|
|
|
|
import time
|
2012-11-08 18:50:23 -05:00
|
|
|
import random
|
2012-11-29 01:00:54 -05:00
|
|
|
import math
|
2012-04-11 18:05:27 -04:00
|
|
|
|
|
|
|
print
|
|
|
|
yappi.start()
|
|
|
|
speeds = {}
|
2013-03-15 21:05:30 -04:00
|
|
|
limit = 22 # was 20
|
2013-01-05 15:00:34 -05:00
|
|
|
for j in [ 2**x for x in range(5,limit) ]:
|
2012-04-11 18:05:27 -04:00
|
|
|
start = time.time()
|
|
|
|
iset = IntervalSet()
|
2012-11-08 18:50:23 -05:00
|
|
|
for i in random.sample(xrange(j),j):
|
2012-04-11 18:05:27 -04:00
|
|
|
interval = Interval(i, i+1)
|
|
|
|
iset += interval
|
2012-04-12 18:39:16 -04:00
|
|
|
speed = (time.time() - start) * 1000000.0
|
2012-11-29 01:00:54 -05:00
|
|
|
printf("%d: %g μs (%g μs each, O(n log n) ratio %g)\n",
|
|
|
|
j,
|
|
|
|
speed,
|
|
|
|
speed/j,
|
|
|
|
speed / (j*math.log(j))) # should be constant
|
2012-04-11 18:05:27 -04:00
|
|
|
speeds[j] = speed
|
|
|
|
yappi.stop()
|
2012-05-04 12:08:32 -04:00
|
|
|
yappi.print_stats(sort_type=yappi.SORTTYPE_TTOT, limit=10)
|